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SRX1387623: Whole genome shotgun sequencing of FSIS1504695 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.2M spots, 497.6M bases, 299.1Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Salmonella
PRJNA292666 • SRP062916 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN04217158 • SRS1135997 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar London
Library:
Name: FSIS1504695 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS1504695.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 1.2M spots, 497.6M bases, 299.1Mb
Run# of Spots# of BasesSizePublished
SRR28293111,196,120497.6M299.1Mb2015-10-27

ID:
1971345

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